mkin/R/endpoints.R, branch v0.9-35 Fitting kinetic models to chemical degradation data (also on github) https://erac.jrwb.de/mkin/atom?h=v0.9-35 2014-07-14T17:07:54Z Nearly complete support for IORE, pending mkinerrmin 2014-07-14T17:07:54Z Johannes Ranke jranke@uni-bremen.de 2014-07-14T17:07:54Z urn:sha1:a69bf39427ff4f93eebdc8bceacb8174ff13c085 Support formation fractions without sink pathway, updates 2014-07-01T22:25:00Z Johannes Ranke jranke@uni-bremen.de 2014-07-01T21:23:52Z urn:sha1:71d43b104999d7aee96d35ff2a9006f739d2df60 Reorder endpoints in R/endpoints.R, update vignettes 2014-06-27T18:20:56Z Johannes Ranke jranke@uni-bremen.de 2014-06-27T18:20:56Z urn:sha1:79df7845e8d97af413c3b274ca3b31f0b4ca6ab0 Avoid calculation of formation fractions if fitted 2014-06-26T11:08:17Z Johannes Ranke jranke@uni-bremen.de 2014-06-26T11:08:17Z urn:sha1:db1646611b4955637226b88d3a07203e5bd04eb7 Fix naming of SFORB DT50_bx values, fix docs 2014-06-26T09:42:37Z Johannes Ranke jranke@uni-bremen.de 2014-06-26T09:42:37Z urn:sha1:787f32a83f08ecd77e0d043bcc17010eecb93fe3 Calculate additional DT50 values for non-SFO models 2014-06-26T09:36:02Z Johannes Ranke jranke@uni-bremen.de 2014-06-26T09:36:02Z urn:sha1:a7e6b9f9a0ba46f84929603296d3dd4a0cbe4787 - Update the TODO list, setting some requirements for version 1.0 2013-04-14T12:42:06Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2013-04-14T12:42:06Z urn:sha1:6168089ac43664c10ca2dc1281c8648fbf3b35a9 - Check that initial values specified using parms.ini are actually needed for the model, stop otherwise - List all formation fractions in the same place in the summary, also if they were fitted in the model - Include an FOMC model coupled to two metabolites in the unit tests - Some updates needed because of the above - Update of static documentation including the vignettes - Update of the mkin vignettes in the vignettes directory git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@82 edb9625f-4e0d-4859-8d74-9fd3b1da38cb - Completion of the multicompartment part of the mkin examples vignette 2013-02-18T22:11:49Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2013-02-18T22:11:49Z urn:sha1:fa10b85d6bb964742d2c5a3e3f633a5238c43d56 - Fix to chi2 error level calculation by correctly returning backtransformed parameters as bparms.optim and bparms.fixed - Adaptations of unit tests, summary and plot functions git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@67 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Put the calculation of dissipation times, formation fractions and SFORB eigenvalues into a separate function 2012-06-18T18:57:07Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2012-06-18T18:57:07Z urn:sha1:3a7751c62e369547db2048b7fc89c21b862010e9 Some testing of this functionality in test.R git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@40 edb9625f-4e0d-4859-8d74-9fd3b1da38cb