mkin/R/mkinds.R, branch v1.2.4Fitting kinetic models to chemical degradation data (also on github)https://erac.jrwb.de/mkin/atom?h=v1.2.42020-12-19T11:23:08ZDimethenamid data, normalisation options2020-12-19T11:23:08ZJohannes Rankejranke@uni-bremen.de2020-12-19T11:23:08Zurn:sha1:e25f0194736a090914c10a9f374946c0b89adc5bmkindsg class to hold groups of datasets2020-11-12T10:11:03ZJohannes Rankejranke@uni-bremen.de2020-11-12T10:04:45Zurn:sha1:7b807680b66269ff911df137f56e26775d84e283
- D24_2014 dataset on aerobic soil degradation of 2,4-D from the EU
assessment as mkindsg object with metadata
- f_time_norm_focus() to do time-step normalisation using the FOCUS
method
- focus_soil_moisture data with default moisture contents at pF1,
pF 2 and pF 2.5 for USDA soil types from FOCUS GW guidance
- Dataset generation scripts in inst/dataset_generation
- Depend on R >= 2.15.1 in order to facilitate the use of
utils::globalVariables()
Use inline documentation for R6 class mkinds2020-03-31T08:31:16ZJohannes Rankejranke@uni-bremen.de2020-03-31T07:52:19Zurn:sha1:64a476750ff57f4c612620bd58cc4ac42812e185Use roxygen for functions and methods2019-10-25T00:03:54ZJohannes Rankejranke@uni-bremen.de2019-10-24T22:37:42Zurn:sha1:0a3eb0893cb4bd1b12f07a79069d1c7f5e991495Improve error model fitting2019-05-03T17:14:15ZJohannes Rankejranke@uni-bremen.de2019-05-03T17:14:15Zurn:sha1:1ef7008be2a72a0847064ad9c2ddcfa16b055482
Now we have a three stage fitting process for
nonconstant error models:
- Unweighted least squares
- Only optimize the error model
- Optimize both
Static documentation rebuilt by pkgdown
Restore NAMESPACE2019-01-31T15:55:20ZJohannes Rankejranke@uni-bremen.de2019-01-31T15:55:20Zurn:sha1:3eefecf0adfbb30b8fb895c244dea6903bcb3e9c
which was accidentally overwritten by pkgdown -> roxygen
Improve initialisation of mkinds2018-11-22T23:29:35ZJohannes Rankejranke@uni-bremen.de2018-11-22T23:29:35Zurn:sha1:b2e3fa2be6a10c29030d04edfdaf7d47d9bddcee
Check in work from the beginning of the week
Remove trailing whitespace, clean headers2016-11-17T17:23:31ZJohannes Rankejranke@uni-bremen.de2016-11-17T17:14:32Zurn:sha1:f3f415520c89f9d8526bf6fadc862ebd44be220d
Also ignore test.R in the top level directory, as it is not meant to
be public
Sort sampling times in mkinds2015-10-24T10:49:22ZJohannes Rankejranke@uni-bremen.de2015-10-24T10:49:22Zurn:sha1:d9a8d5d888cb443d16faff87ae4203fb39625e86Add the R6 class mkinds2015-10-19T14:10:34ZJohannes Rankejranke@uni-bremen.de2015-10-19T14:10:34Zurn:sha1:2ded0424ba1a2ad6d6e265dd785b9c5f54d53319