<feed xmlns='http://www.w3.org/2005/Atom'>
<title>mkin/R/plot.nlme.mmkin.R, branch stackoverflow_71340826</title>
<subtitle>Fitting kinetic models to chemical degradation data (also on github)</subtitle>
<id>https://erac.jrwb.de/mkin/atom?h=stackoverflow_71340826</id>
<link rel='self' href='https://erac.jrwb.de/mkin/atom?h=stackoverflow_71340826'/>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/'/>
<updated>2020-11-09T15:33:19Z</updated>
<entry>
<title>Merge plot methods for nlme.mmkin and saem.mmkin</title>
<updated>2020-11-09T15:33:19Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-11-09T15:33:19Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=a1631098acfc3352e19c331e568bd6f5766b3c3d'/>
<id>urn:sha1:a1631098acfc3352e19c331e568bd6f5766b3c3d</id>
<content type='text'>
This avoids code duplication
</content>
</entry>
<entry>
<title>object$mmkin_orig -&gt; object$mmkin</title>
<updated>2020-11-09T10:59:16Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-11-09T10:59:16Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=a52d76a13f36c112e27383af1cac3f98b1bbed0a'/>
<id>urn:sha1:a52d76a13f36c112e27383af1cac3f98b1bbed0a</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Add summary method for nlme.mmkin objects</title>
<updated>2020-10-27T14:36:46Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-27T14:34:14Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=a5874ab7fce4616e80be69366ff0685332f47bf1'/>
<id>urn:sha1:a5874ab7fce4616e80be69366ff0685332f47bf1</id>
<content type='text'>
Improve and update docs
</content>
</entry>
<entry>
<title>Put the legend in its own area for plot.nlme.mmkin</title>
<updated>2020-10-26T13:23:04Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-26T13:23:04Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=b81cd4b32c8411637f31164cc696a471b1074baa'/>
<id>urn:sha1:b81cd4b32c8411637f31164cc696a471b1074baa</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Fix another bug in plot.nlme.mmkin</title>
<updated>2020-10-26T05:30:32Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-26T05:30:32Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=9bfc85d605ae54623f63b7e3cdb36f5ac64876c1'/>
<id>urn:sha1:9bfc85d605ae54623f63b7e3cdb36f5ac64876c1</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Fix a bug in plot.nlme.mmkin</title>
<updated>2020-10-26T04:35:49Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-26T04:35:49Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=885425c78979b4b521b06f7dc6243b536c04c19f'/>
<id>urn:sha1:885425c78979b4b521b06f7dc6243b536c04c19f</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Fix a bug for nlme with parent only, improve examples</title>
<updated>2020-10-24T00:18:59Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-24T00:18:59Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=60270e2849ebd48eaf57b83eb1aa9fbe53281f8b'/>
<id>urn:sha1:60270e2849ebd48eaf57b83eb1aa9fbe53281f8b</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Improve plot layout</title>
<updated>2020-10-23T23:42:54Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-23T23:42:54Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=6ad4e443b662e8c61b1b350d3e639e821a8ff764'/>
<id>urn:sha1:6ad4e443b662e8c61b1b350d3e639e821a8ff764</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Plot method for nlme.mmkin objects</title>
<updated>2020-10-23T22:32:00Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-23T22:32:00Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=dd80ab5d64bc6b56587b0542dc95e965a3a25590'/>
<id>urn:sha1:dd80ab5d64bc6b56587b0542dc95e965a3a25590</id>
<content type='text'>
Update docs
</content>
</entry>
<entry>
<title>Include random effects in starting parameters</title>
<updated>2020-04-15T17:00:06Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-04-15T16:13:04Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=42171ba55222383a0d47e5aacd46a972819e7812'/>
<id>urn:sha1:42171ba55222383a0d47e5aacd46a972819e7812</id>
<content type='text'>
- mean_degparms() now optionally returns starting values for fixed and
  random effects, which makes it possible to obtain acceptable fits
  also in more difficult cases (with more parameters)
- Fix the anova method, as it is currently not enough to inherit from
  lme: https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17761
- Show fit information, and per default also errmin information
  in plot.nlme.mmkin()
- Examples for nlme.mmkin: Decrease tolerance and increase the number of
  iterations in the PNLS step in order to be able to fit FOMC-SFO and
  DFOP-SFO
</content>
</entry>
</feed>
