mkin/R/transform_odeparms.R, branch v1.0.3Fitting kinetic models to chemical degradation data (also on github)https://erac.jrwb.de/mkin/atom?h=v1.0.32021-02-04T10:41:06ZDocumentation improvements, mainly fixing example code2021-02-04T10:41:06ZJohannes Rankejranke@uni-bremen.de2021-02-04T10:24:22Zurn:sha1:ac183c732317cf6ede26a2ee127604a407f0a6b3
The errors in the example code were in the \dontrun sections, so they
were not caught by CRAN checks. In addition, the static help files
generated with pkgdown were cached, so I noticed the errors only
after completely regenerating the documentation for version 1.0.0.
Fast analytical solutions for saemix, update.mmkin2020-11-05T23:03:29ZJohannes Rankejranke@uni-bremen.de2020-11-05T23:03:29Zurn:sha1:b5b446b718b15ccaae5b197e147fc1358f0f564e
Also, use logit transformation for g and for solitary formation
fractions, addressing #10.
Improve docs2020-05-15T09:06:06ZJohannes Rankejranke@uni-bremen.de2020-05-15T09:06:06Zurn:sha1:da33f5c04ab9d98cad0b3ef5ab9f173f612f14efImprove documentation, now using a spell checker2020-05-12T08:58:25ZJohannes Rankejranke@uni-bremen.de2020-05-12T08:58:25Zurn:sha1:01284e456dc6df8e064a7a42f194fcd81d9ce7a1Use roxygen for functions and methods2019-10-25T00:03:54ZJohannes Rankejranke@uni-bremen.de2019-10-24T22:37:42Zurn:sha1:0a3eb0893cb4bd1b12f07a79069d1c7f5e991495Add the logistic model2019-02-21T13:50:27ZJohannes Rankejranke@uni-bremen.de2019-02-21T13:34:45Zurn:sha1:d89e3d22eb9dc383897b09e9c5aa1b57f65cdbf0Remove trailing whitespace, clean headers2016-11-17T17:23:31ZJohannes Rankejranke@uni-bremen.de2016-11-17T17:14:32Zurn:sha1:f3f415520c89f9d8526bf6fadc862ebd44be220d
Also ignore test.R in the top level directory, as it is not meant to
be public
Low-level generation of compiled models2015-06-20T01:59:56ZJohannes Rankejranke@uni-bremen.de2015-06-19T23:06:24Zurn:sha1:062b9cc1d084e8bb5e552076fc48ade4b3050644
As it is unclear if and when ccSolve will be published on CRAN,
the generation, compilation and use of the C version of the
system of differential equations was developed for mkin, inspired and
guided by the code from the ccSolve package. Many thanks again to
Karline Soetaert for all of her work on this and other R packages.
Now all model types, including the Hockey-Stick model for the parent
compund and the IORE model for parent and/or metabolites can be compiled.
IORE working for parent and metabolites, introduce mkinsub2014-11-12T15:59:48ZJohannes Rankejranke@uni-bremen.de2014-11-12T15:59:48Zurn:sha1:c04d0bb0e795b67b6958150e8524c5265587f618Merge branch 'master' into iore2014-11-12T12:44:17ZJohannes Rankejranke@uni-bremen.de2014-11-12T12:44:17Zurn:sha1:401570aa9e58c4a2f2e939f37f496453d97d3f33