mkin/man/saem.Rd, branch v1.2.0Fitting kinetic models to chemical degradation data (also on github)https://erac.jrwb.de/mkin/atom?h=v1.2.02022-11-14T19:03:42ZAutomatic starting parameters for saem.mmkin2022-11-14T19:03:42ZJohannes Rankejranke@uni-bremen.de2022-11-14T19:03:42Zurn:sha1:21ad91256dc29423bd905de5c298fd23862b1f3b
For the case of mkin transformations. This gives faster convergence,
and appears to avoid problems with numeric ODE solutions
Never fail with errors in saem.mmkin2022-11-04T06:48:04ZJohannes Rankejranke@uni-bremen.de2022-11-04T06:48:04Zurn:sha1:0389d523f049945c85eba42d4a006523595043f0
I think it is always preferable to be able to investigate the
saemix object returned.
Fix R CMD check2022-10-31T16:01:58ZJohannes Rankejranke@uni-bremen.de2022-10-31T16:01:58Zurn:sha1:300aa6ec27529f46deda07874566dc8fcee4e6e7Complete documentation and fix a bug2022-10-25T08:35:39ZJohannes Rankejranke@uni-bremen.de2022-10-25T08:35:39Zurn:sha1:e514f8235ee5398da5c5c83d472ca99dd5324066
The bug was introduced by the changes in summary.saem.mmkin.R and
surfaced in the tests when using saemix transformations.
Add a simple anova method for model comparison2022-10-21T10:33:35ZJohannes Rankejranke@uni-bremen.de2022-10-21T10:33:35Zurn:sha1:32e38914d066c28db060e912b5df6c24470c9e14
Update docs
Simplify the removal of random effects2022-10-05T06:10:43ZJohannes Rankejranke@uni-bremen.de2022-10-05T06:10:43Zurn:sha1:e7e8105390ebf3d6f034811bc7cce1d9640b7357
This is achieved by introducing the argument 'no_random_effect' to the
saem function.
Diagnostic plots for multistart method2022-09-16T08:12:54ZJohannes Rankejranke@uni-bremen.de2022-09-16T08:12:54Zurn:sha1:03e1598a3c79911a497758fe382461f288bf05e6More work on multistart2022-09-13T07:27:42ZJohannes Rankejranke@uni-bremen.de2022-09-13T07:27:42Zurn:sha1:569a5790c2f8cca4dc6d8c5a53bd3b7a9f65441fBatch processing for hierarchical fits2022-08-10T10:58:35ZJohannes Rankejranke@uni-bremen.de2022-08-10T10:58:35Zurn:sha1:9e346fabe99de71b21ef085be102027cfa774910
- 'R/mhmkin.R': New method for performing multiple hierarchical mkin fits in one function call, optionally in parallel.
- 'R/saem.R': 'logLik' and 'update' methods for 'saem.mmkin' objects.
- 'R/illparms.R': Add methods for 'saem.mmkin' and 'mhmkin' objects.
tests: Use 2 cores on travis, should work according to docs
Add some more tests2022-03-01T10:52:03ZJohannes Rankejranke@uni-bremen.de2022-03-01T10:23:49Zurn:sha1:2b331b5f9420943ebe26b60361578038ec560f88