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<title>mkin/man/transform_odeparms.Rd, branch v0.9.43</title>
<subtitle>Fitting kinetic models to chemical degradation data (also on github)</subtitle>
<id>https://erac.jrwb.de/mkin/atom?h=v0.9.43</id>
<link rel='self' href='https://erac.jrwb.de/mkin/atom?h=v0.9.43'/>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/'/>
<updated>2015-06-29T07:40:46Z</updated>
<entry>
<title>Quiet fitting in examples and more links for static docs.</title>
<updated>2015-06-29T07:40:46Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2015-06-29T06:40:19Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=164c4af404b59f9144f68fcefeeac34326a34372'/>
<id>urn:sha1:164c4af404b59f9144f68fcefeeac34326a34372</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Reorganize transform_odeparms example, reduce check time</title>
<updated>2015-06-20T16:38:03Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2015-06-20T16:38:03Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=f0da2e311eb33fa5851956e958e91c25b4da5c1e'/>
<id>urn:sha1:f0da2e311eb33fa5851956e958e91c25b4da5c1e</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Make checking faster, testing is done by tests</title>
<updated>2015-05-18T14:58:44Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2015-05-18T14:58:44Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=d337a9665d9261d18734d81edc8fe4b569635e71'/>
<id>urn:sha1:d337a9665d9261d18734d81edc8fe4b569635e71</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Bugfix, model shorthand, state.ini[[1]] from observed data</title>
<updated>2014-07-21T07:20:58Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2014-07-21T06:20:44Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=a1567638a3ba9f4d62fa199525097a94ddfd7912'/>
<id>urn:sha1:a1567638a3ba9f4d62fa199525097a94ddfd7912</id>
<content type='text'>
- The bug occurred when using transform_rates=FALSE for FOMC, DFOP or HS
- Make it possible to use mkinfit("SFO", ...)
- Take initial mean value at time zero for the variable with the highest
  value in the observed data
- Update of vignette/FOCUS_L
- Improve the Makefile to build single vignettes
</content>
</entry>
<entry>
<title>Support formation fractions without sink pathway, updates</title>
<updated>2014-07-01T22:25:00Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2014-07-01T21:23:52Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=71d43b104999d7aee96d35ff2a9006f739d2df60'/>
<id>urn:sha1:71d43b104999d7aee96d35ff2a9006f739d2df60</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Adapt the documentation for the HS model</title>
<updated>2014-04-28T16:39:48Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2014-04-28T16:39:48Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=1c10a3a381f03ecd3bf43e5cece2ebc18b4986ad'/>
<id>urn:sha1:1c10a3a381f03ecd3bf43e5cece2ebc18b4986ad</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Possibility to fit without parameter transformation</title>
<updated>2014-04-22T17:08:09Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2014-04-22T17:08:09Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=a2f772990127891f9596b79771832bc23777a89a'/>
<id>urn:sha1:a2f772990127891f9596b79771832bc23777a89a</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Fix the example of transform_odeparms help that was broken by making the column</title>
<updated>2013-10-19T05:01:47Z</updated>
<author>
<name>jranke</name>
<email>jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb</email>
</author>
<published>2013-10-19T05:01:47Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=ff00631200c3ec1f0ca374b7204b199343717e15'/>
<id>urn:sha1:ff00631200c3ec1f0ca374b7204b199343717e15</id>
<content type='text'>
names of the data frames "start" and "transformed" in the mkinfit objects
consistent.



git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@119 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
</content>
</entry>
<entry>
<title>- Fitting and summaries now work with the new parameter transformations.</title>
<updated>2012-04-10T21:50:22Z</updated>
<author>
<name>jranke</name>
<email>jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb</email>
</author>
<published>2012-04-10T21:50:22Z</published>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/commit/?id=c1144753adfa0809003085009ebd85f8af9beda8'/>
<id>urn:sha1:c1144753adfa0809003085009ebd85f8af9beda8</id>
<content type='text'>
- The SFORB models with metabolites is broken (see TODO)
- Moved the vignette to the location recommended since R 2.14
- Added the missing documentation
- Commented out the schaefer_complex_case test, as this version of
  mkin is not able to fit a model without sink and therefore 
  mkin estimated parameters are quite different




git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@22 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
</content>
</entry>
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