mkin/test.log, branch v0.9.49.8 Fitting kinetic models to chemical degradation data (also on github) https://erac.jrwb.de/mkin/atom?h=v0.9.49.8 2019-11-13T20:15:35Z Calculate Akaike weights 2019-11-13T20:15:35Z Johannes Ranke jranke@uni-bremen.de 2019-11-13T20:15:35Z urn:sha1:c3700bec3a704660d3ade7a54c56b7084beb02b4 Add a lack-of-fit test 2019-11-09T00:05:51Z Johannes Ranke jranke@uni-bremen.de 2019-11-09T00:05:51Z urn:sha1:20b9c584e7c43ecbb708459e531c24a1a4751e17 - Switch an example dataset in the test setup to a dataset with replicates, adapt tests - Skip the test for lrtest with an update specification as it does not only fail when pkgdown generates static help pages, but also in testthat Fix standardized residual plots in 'plot_res' 2019-11-04T23:05:34Z Johannes Ranke jranke@uni-bremen.de 2019-11-04T23:05:34Z urn:sha1:ead1f286271923f57d83aed41cb34181a10773ef Scaled residual plots 2019-11-04T22:48:20Z Johannes Ranke jranke@uni-bremen.de 2019-11-04T22:48:20Z urn:sha1:3410513f55b3f8b5c4331f4fb4487613d3a28208 Fix bug in yesterdays release, add methods for BIC 2019-11-01T11:19:03Z Johannes Ranke jranke@uni-bremen.de 2019-11-01T11:19:03Z urn:sha1:bbb74d4f60033899cd5cdd36aa70f157bc52209e Reorganize tests to reduce time on winbuilder 2019-10-31T10:47:23Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T10:47:23Z urn:sha1:99947961be1cf0a7eed80426bc3d8cc6daa6d106 Add likelihood ratio test and other methods, fixes 2019-10-31T00:59:05Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T00:55:01Z urn:sha1:7091d3738e7e55acb20edb88772b228f6f5b6c98 The likelihood ratio test method is lrtest, in addition, methods for update and residuals were added. Fix the cutoff for likelihood based intervals 2019-10-28T12:23:40Z Johannes Ranke jranke@uni-bremen.de 2019-10-28T12:23:40Z urn:sha1:bd761d879a95872f82e6d8f893634a61e122a938 The cutoff now matches what is given by Venzon and Moolgavkar (1988). Also, confidence intervals closely match intervals obtained with stats4::confint in the test case where an stats4::mle object is created from the likelihood function in one test case. Static documentation rebuilt by pkgdown Fix checks and tests 2019-10-26T20:52:53Z Johannes Ranke jranke@uni-bremen.de 2019-10-26T20:52:53Z urn:sha1:6e5630a0df7e857697ff2ce4730a5f7f45b67377 Static documentation rebuilt by pkgdown Use roxygen for functions and methods 2019-10-25T00:03:54Z Johannes Ranke jranke@uni-bremen.de 2019-10-24T22:37:42Z urn:sha1:0a3eb0893cb4bd1b12f07a79069d1c7f5e991495