mkin/tests/testthat/test_saemix_parent.R, branch v1.2.10 Fitting kinetic models to chemical degradation data (also on github) https://erac.jrwb.de/mkin/atom?h=v1.2.10 2025-02-13T13:57:25Z Restrict number of cores for CRAN checks 2025-02-13T13:57:25Z Johannes Ranke johannes.ranke@jrwb.de 2025-02-13T13:57:25Z urn:sha1:4c3ce8a3e77969162a6717cb2c5d2dd9f02ef1c9 Bump version, fix test from last commit, check and test 2023-11-23T05:17:28Z Johannes Ranke jranke@uni-bremen.de 2023-11-23T05:17:28Z urn:sha1:43af185533b11327368148a44e9295ea3eb3abb1 fix: 'R/illparms.R': An ill-defined random effect is now also found if there is only one random effect in the model. Also add a test for this. 2023-11-23T04:33:55Z Johannes Ranke jranke@uni-bremen.de 2023-11-23T04:20:17Z urn:sha1:a1b5d63e031d22b190e9e9fc30753b699ad6b4ea Use cluster with two cores to reduce windows check time 2022-11-18T19:35:06Z Johannes Ranke jranke@uni-bremen.de 2022-11-18T19:35:06Z urn:sha1:b6b7e387261e5483f1bdfafaaa975e2f24c6567c Make mixed model test data permanent to ensure reproducibility 2022-11-18T18:14:47Z Johannes Ranke jranke@uni-bremen.de 2022-11-18T18:14:47Z urn:sha1:5364f037a72863ef5ba81e14ba4417f68fd389f9 To ensure that tests on different platforms work on the same data, the mixed modelling test data previosly generated in tests/testthat/setup_script.R were generated once using the script in inst/dataset/generation/ds_mixed.R, and are now distributed with the package. Automatic starting parameters for saem.mmkin 2022-11-14T19:03:42Z Johannes Ranke jranke@uni-bremen.de 2022-11-14T19:03:42Z urn:sha1:21ad91256dc29423bd905de5c298fd23862b1f3b For the case of mkin transformations. This gives faster convergence, and appears to avoid problems with numeric ODE solutions Fix illparms tests 2022-11-01T09:39:29Z Johannes Ranke jranke@uni-bremen.de 2022-11-01T09:39:29Z urn:sha1:0c18f5de9b2f948d0b5e22a3b3deed16d64d8006 Improved printing for illparms() 2022-11-01T08:46:33Z Johannes Ranke jranke@uni-bremen.de 2022-11-01T08:46:33Z urn:sha1:fd4bd411df739903279d8b52faa19d5059afbda7 For the case of single fits and no ill-defined parameters found Really test anova output, test covariates 2022-10-26T12:13:09Z Johannes Ranke jranke@uni-bremen.de 2022-10-26T12:13:09Z urn:sha1:0e9220c6b9132602a3d69e4be582a02da8b07822 Reduced sfo model for multistart.saem.mkin tests 2022-10-26T07:07:04Z Johannes Ranke jranke@uni-bremen.de 2022-10-26T07:07:04Z urn:sha1:3c5b2596daef4ed0ee5c38a7141fdf48dbe7c070