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<title>mkin/tests/testthat, branch C_analytical</title>
<subtitle>Fitting kinetic models to chemical degradation data (also on github)</subtitle>
<id>https://erac.jrwb.de/mkin/atom?h=C_analytical</id>
<link rel='self' href='https://erac.jrwb.de/mkin/atom?h=C_analytical'/>
<link rel='alternate' type='text/html' href='https://erac.jrwb.de/mkin/'/>
<updated>2020-10-27T14:36:46Z</updated>
<entry>
<title>Add summary method for nlme.mmkin objects</title>
<updated>2020-10-27T14:36:46Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-27T14:34:14Z</published>
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<id>urn:sha1:a5874ab7fce4616e80be69366ff0685332f47bf1</id>
<content type='text'>
Improve and update docs
</content>
</entry>
<entry>
<title>Fix issues for release</title>
<updated>2020-10-08T07:31:35Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-10-08T07:31:35Z</published>
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<id>urn:sha1:bc3825ae2d12c18ea3d3caf17eb23c93fef180b8</id>
<content type='text'>
</content>
</entry>
<entry>
<title>mkinfit: Ignore unused components of state.ini</title>
<updated>2020-07-17T14:27:46Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-07-17T14:27:46Z</published>
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<id>urn:sha1:a7e209b553e2e99ffc9aa2b003f9b73b9ac4b985</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Improve tests</title>
<updated>2020-07-15T12:16:29Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-07-15T12:11:25Z</published>
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<id>urn:sha1:39b0b93b5d15a3a0e9126f29c753e2fef75dc701</id>
<content type='text'>
- Reduce significant digits for the objective function output in
mkinfit(..., quiet = FALSE) as R and R-devel gave different output on my
system
- Add makefile target 'devtest' for testing with R-devel, in order
to fix problems showing up with R-devel on Travis
</content>
</entry>
<entry>
<title>Improve handling of (partially) failing fits</title>
<updated>2020-07-15T10:30:39Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-07-15T10:30:39Z</published>
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<id>urn:sha1:9f8e1eb33b586beb7e889212bdababa081b6ff67</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Test plots on r-devel only</title>
<updated>2020-06-15T08:27:19Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-06-15T08:27:19Z</published>
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<id>urn:sha1:8363b1c179c4e83d97c3c0c4cfa365f92c7832af</id>
<content type='text'>
following the arguments of Xavier Robin https://github.com/r-lib/vdiffr/issues/86#issuecomment-636447231
</content>
</entry>
<entry>
<title>Fix a bug, update for current vdiffr</title>
<updated>2020-06-15T07:05:27Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-06-15T07:05:27Z</published>
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<id>urn:sha1:068b168d78c9550a77514e0c39923f8d40b48b03</id>
<content type='text'>
Vignette FOCUS_L failed as I had introduced a bug in the handling of
warnings.

Current vdiffr only runs visual tests if R &lt; 4.1.0, skipping r-devel for now,
see https://github.com/r-lib/vdiffr/commit/630a29d013361fd63fea242f531e2db6aef37919
</content>
</entry>
<entry>
<title>Improve handling of warnings, reorganize tests</title>
<updated>2020-05-29T14:05:11Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-05-29T14:05:11Z</published>
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<id>urn:sha1:e6f9e9ca89e35e610d9895b979f1351a47451db0</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Warn if standardized residuals are unlikely normal</title>
<updated>2020-05-29T13:03:04Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-05-29T13:03:04Z</published>
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<id>urn:sha1:510436646b1bdd5b8cfab70be29334bd3cc9c828</id>
<content type='text'>
This revealed a bug in the data returned in mkinfit$data in the case
of the d_3 algorithm, which also affected the residual plot - the
data from the direct fitting was not returned even if this was
the better method.
</content>
</entry>
<entry>
<title>use_of_ff = "max" for shorthand models like "SFO"</title>
<updated>2020-05-28T10:24:32Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2020-05-28T10:24:32Z</published>
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<id>urn:sha1:609bfe2fd7ecbdcad5f5d641f0db51541dcd6a4e</id>
<content type='text'>
</content>
</entry>
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