From 91c5db736a4d3f2290a0cc5698fb4e35ae7bda59 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Wed, 18 May 2022 21:26:17 +0200
Subject: Remove outdated comment in FOCUS L vignette, update docs

This also adds the first benchmark results obtained on my laptop system
---
 vignettes/web_only/benchmarks.rmd | 16 +++-------------
 1 file changed, 3 insertions(+), 13 deletions(-)

(limited to 'vignettes/web_only/benchmarks.rmd')

diff --git a/vignettes/web_only/benchmarks.rmd b/vignettes/web_only/benchmarks.rmd
index c743234d..9697f96b 100644
--- a/vignettes/web_only/benchmarks.rmd
+++ b/vignettes/web_only/benchmarks.rmd
@@ -116,16 +116,6 @@ save(mkin_benchmarks, file = "~/git/mkin/vignettes/web_only/mkin_benchmarks.rda"
 
 ## Results
 
-Currently, we only have benchmark information on one system, therefore only the mkin
-version is shown with the results below. Timings are in seconds, shorter is better.
-All results were obtained by serial, i.e. not using multiple computing cores.
-
-```{r, include = FALSE}
-dimnames(mkin_benchmarks) <- list(as.character(mkin_benchmarks$mkin),
-  c("CPU", "OS", "mkin version", paste0("t", 1:11, " [s]")))
-```
-
-
 Benchmarks for all available error models are shown.
 
 ### Parent only
@@ -134,7 +124,7 @@ Constant variance (t1) and two-component error model (t2) for four models
 fitted to two datasets, i.e. eight fits for each test.
 
 ```{r, echo = FALSE}
-kable(mkin_benchmarks[, 4:5], rownames = "mkin version")
+kable(mkin_benchmarks[, 4:5])
 ```
 
 ### One metabolite
@@ -143,7 +133,7 @@ Constant variance (t3), two-component error model (t4), and variance by variable
 for three models fitted to one dataset, i.e. three fits for each test.
 
 ```{r, echo = FALSE}
-kable(mkin_benchmarks[, 6:8], rownames = "mkin version")
+kable(mkin_benchmarks[, 6:8])
 ```
 
 ### Two metabolites
@@ -153,5 +143,5 @@ variance by variable (t10 and t11) for one model fitted to one dataset, i.e.
 one fit for each test.
 
 ```{r, echo = FALSE}
-kable(mkin_benchmarks[, 9:14], rownames = "mkin version")
+kable(mkin_benchmarks[, 9:14])
 ```
-- 
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