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authorJohannes Ranke <johannes.ranke@jrwb.de>2026-03-05 15:47:24 +0100
committerJohannes Ranke <johannes.ranke@jrwb.de>2026-03-05 15:47:24 +0100
commitabe52f193a71403dcb3e6e71b2f89d215652c5f0 (patch)
treeb6ecef75eca11a441471abfa9b551c39da21002a /man
parent63b5837a0c99e916ee57d778879f7aef57e86e88 (diff)
Don't run examples per default
This is because PubChem and BCPC could be unavailable, e.g. on R-Universe or CRAN.
Diffstat (limited to 'man')
-rw-r--r--man/chent.Rd3
-rw-r--r--man/pai.Rd3
-rw-r--r--man/plot.chent.Rd3
3 files changed, 9 insertions, 0 deletions
diff --git a/man/chent.Rd b/man/chent.Rd
index 464c759..b348070 100644
--- a/man/chent.Rd
+++ b/man/chent.Rd
@@ -12,6 +12,8 @@ information is retrieved from the internet. Additionally, it can be
generated using RDKit if RDKit and its python bindings are installed.
}
\examples{
+# Don't run examples per default, as PubChem may be unavailable
+\dontrun{
caffeine <- chent$new("caffeine")
print(caffeine)
if (!is.null(caffeine$Picture)) {
@@ -20,6 +22,7 @@ if (!is.null(caffeine$Picture)) {
oct <- chent$new("1-octanol", smiles = "CCCCCCCCO", pubchem = FALSE)
print(oct)
}
+}
\section{Public fields}{
\if{html}{\out{<div class="r6-fields">}}
\describe{
diff --git a/man/pai.Rd b/man/pai.Rd
index c61bb38..2f94b90 100644
--- a/man/pai.Rd
+++ b/man/pai.Rd
@@ -14,6 +14,8 @@ the complete result of querying the BCPC compendium using
\link[webchem:bcpc_query]{bcpc_query}.
}
\examples{
+# Don't run examples per default, as PubChem may be unavailable
+\dontrun{
atr <- pai$new("atrazine")
print(atr)
if (!is.null(atr$Picture)) {
@@ -23,6 +25,7 @@ if (!is.null(atr$Picture)) {
decanol <- pai$new("1-Decanol")
print(decanol)
}
+}
\section{Super class}{
\code{\link[chents:chent]{chents::chent}} -> \code{pai}
}
diff --git a/man/plot.chent.Rd b/man/plot.chent.Rd
index ecaa01b..1ac1be6 100644
--- a/man/plot.chent.Rd
+++ b/man/plot.chent.Rd
@@ -15,9 +15,12 @@
Plot method for chent objects
}
\examples{
+# Don't run examples per default, as PubChem may be unavailable
+\dontrun{
caffeine <- chent$new("caffeine")
print(caffeine)
if (!is.null(caffeine$Picture)) {
plot(caffeine)
}
}
+}

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