Update docs, check and testHEADmain

3 files changed, 15 insertions, 18 deletions

diff --git a/log/build.log b/log/build.log
index 4b09656..fb1f5c2 100644
--- a/log/build.log
+++ b/log/build.log
@@ -3,7 +3,6 @@
 * checking DESCRIPTION meta-information ... OK
 * checking for LF line-endings in source and make files and shell scripts
 * checking for empty or unneeded directories
-Removed empty directory ‘pfm/tests/testthat/_snaps’
 * re-saving image files
 * building ‘pfm_0.6.5.tar.gz’
 
diff --git a/log/check.log b/log/check.log
index 8ba020c..6b8ff0b 100644
--- a/log/check.log
+++ b/log/check.log
@@ -1,10 +1,10 @@
-* using log directory ‘/home/agsad.admin.ch/f80868656/projects/pfm/pfm.Rcheck’
+* using log directory ‘/home/jranke/git/pfm/pfm.Rcheck’
 * using R version 4.5.2 (2025-10-31)
 * using platform: x86_64-pc-linux-gnu
 * R was compiled by
-    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
-    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
-* running under: Ubuntu 24.04.3 LTS
+    gcc (Debian 14.2.0-19) 14.2.0
+    GNU Fortran (Debian 14.2.0-19) 14.2.0
+* running under: Debian GNU/Linux 13 (trixie)
 * using session charset: UTF-8
 * using options ‘--no-tests --as-cran’
 * checking for file ‘pfm/DESCRIPTION’ ... OK
@@ -14,7 +14,7 @@
 * checking CRAN incoming feasibility ... NOTE
 Maintainer: ‘Johannes Ranke <johannes.ranke@agroscope.admin.ch>’
 
-Size of tarball: 8537003 bytes
+Size of tarball: 8535898 bytes
 * checking package namespace information ... OK
 * checking package dependencies ... OK
 * checking if this is a source package ... OK
@@ -29,7 +29,8 @@ Size of tarball: 8537003 bytes
   sub-directories of 1Mb or more:
     testdata   9.9Mb
 * checking package directory ... OK
-* checking for future file timestamps ... OK
+* checking for future file timestamps ... NOTE
+unable to verify current time
 * checking DESCRIPTION meta-information ... OK
 * checking top-level files ... OK
 * checking for left-over files ... OK
@@ -62,20 +63,17 @@ Size of tarball: 8537003 bytes
 * checking data for non-ASCII characters ... OK
 * checking LazyData ... OK
 * checking data for ASCII and uncompressed saves ... OK
-* checking examples ... [20s/12s] OK
+* checking examples ... OK
 * checking for unstated dependencies in ‘tests’ ... OK
 * checking tests ... SKIPPED
 * checking PDF version of manual ... OK
-* checking HTML version of manual ... NOTE
-Skipping checking HTML validation: no command 'tidy' found.
-Please obtain a recent version of HTML Tidy by downloading a binary
-release or compiling the source code from <https://www.html-tidy.org/>.
+* checking HTML version of manual ... OK
 * checking for non-standard things in the check directory ... OK
 * checking for detritus in the temp directory ... OK
 * DONE
 
 Status: 2 NOTEs
 See
-  ‘/home/agsad.admin.ch/f80868656/projects/pfm/pfm.Rcheck/00check.log’
+  ‘/home/jranke/git/pfm/pfm.Rcheck/00check.log’
 for details.
 
diff --git a/log/test.log b/log/test.log
index 3b7092e..c2a6fc7 100644
--- a/log/test.log
+++ b/log/test.log
@@ -2,17 +2,17 @@
 ✔ | F W  S  OK | Context
 ✔ |          7 | Exposit calculations
 ✔ |          6 | Geometric mean calculation
-✔ |          1 | Check max_twa for parent mkinfit models against analytical solutions [1.1s]
+✔ |          1 | Check max_twa for parent mkinfit models against analytical solutions
 ✔ |          1 | Simple PEC sediment calculations
 ✔ |         17 | Simple PEC soil calculations
 ✔ |         11 | Simple PEC surface water calculations with drift entry
 ✔ |          1 | Actual and time weighted average concentrations for SFO kinetics
 ✔ |          9 | FOCUS Step 1 calculations
 ✔ |          8 | FOCUS Steps 12 input files
-✔ |          7 | Read and analyse TOXSWA cwa files [4.8s]
-✔ |         17 | UK drainage PEC calculations
+✔ |          7 | Read and analyse TOXSWA cwa files [4.4s]
+✔ |         18 | UK drainage PEC calculations
 
 ══ Results ═════════════════════════════════════════════════════════════════════════════════════════
-Duration: 6.9 s
+Duration: 6.3 s
 
-[ FAIL 0 | WARN 0 | SKIP 0 | PASS 85 ]
+[ FAIL 0 | WARN 0 | SKIP 0 | PASS 86 ]