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diff --git a/docs/reference/plot.TOXSWA_cwa.md b/docs/reference/plot.TOXSWA_cwa.md new file mode 100644 index 0000000..1f5f07f --- /dev/null +++ b/docs/reference/plot.TOXSWA_cwa.md @@ -0,0 +1,93 @@ +# Plot TOXSWA surface water concentrations + +Plot TOXSWA hourly concentrations of a chemical substance in a specific +segment of a TOXSWA surface water body. + +## Usage + +``` r +# S3 method for class 'TOXSWA_cwa' +plot( + x, + time_column = c("datetime", "t", "t_firstjan", "t_rel_to_max"), + xlab = "default", + ylab = "default", + add = FALSE, + threshold_factor = 1000, + thin_low = 1, + total = FALSE, + LC_TIME = "C", + ... +) +``` + +## Arguments + +- x: + + The TOXSWA_cwa object to be plotted. + +- time_column: + + What should be used for the time axis. If "t_firstjan" is chosen, the + time is given in days relative to the first of January in the first + year. + +- xlab, ylab: + + Labels for x and y axis. + +- add: + + Should we add to an existing plot? + +- threshold_factor: + + The factor by which the data have to be lower than the maximum in + order to get thinned for plotting (see next argument). + +- thin_low: + + If an integer greater than 1, the data close to zero (smaller than + 1/threshold_factor of the maximum) in the series will be thinned by + this factor in order to decrease the amount of data that is included + in the plots + +- total: + + Should the total concentration in water be plotted, including + substance sorbed to suspended matter? + +- LC_TIME: + + Specification of the locale used to format dates + +- ...: + + Further arguments passed to `plot` if we are not adding to an existing + plot + +## Author + +Johannes Ranke + +## Examples + +``` r +H_sw_D4_pond <- read.TOXSWA_cwa("00001p_pa.cwa", + basedir = "SwashProjects/project_H_sw/TOXSWA", + zipfile = system.file("testdata/SwashProjects.zip", package = "pfm")) +plot(H_sw_D4_pond) + +plot(H_sw_D4_pond, time_column = "t") + +plot(H_sw_D4_pond, time_column = "t_firstjan") + +plot(H_sw_D4_pond, time_column = "t_rel_to_max") + + +H_sw_R1_stream <- read.TOXSWA_cwa("00003s_pa.cwa", + basedir = "SwashProjects/project_H_sw/TOXSWA", + zipfile = system.file("testdata/SwashProjects.zip", package = "pfm")) +plot(H_sw_R1_stream, time_column = "t_rel_to_max") +``` |
